Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY22052.1KEGG: sjj:SPJ_0724 2.4e-31 methionine import ATP-binding protein MetN K02003; Psort location: CytoplasmicMembrane, score: 9.96. (220 aa)    
Predicted Functional Partners:
EKY22053.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.902
EKY22054.1
Hypothetical protein.
       0.782
EKY22055.1
KEGG: uma:UM06027.1 0.00062 hypothetical protein; K01892 histidyl-tRNA synthetase.
       0.782
EKY29785.1
KEGG: pha:PSHAa1626 2.0e-45 sodium ABC exporter ATP-binding protein K09697; Psort location: CytoplasmicMembrane, score: 8.78.
  
     0.732
EKY27885.1
Efflux ABC transporter, permease protein; KEGG: apj:APJL_0621 0.00032 putative ABC transporter ATP-binding protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 9.36.
  
 0.687
EKY22584.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_1760 2.1e-206 ABC transporter ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.687
EKY28757.1
ABC transporter, ATP-binding domain protein; KEGG: cce:Ccel_3414 7.5e-37 ABC transporter related; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.675
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   
 0.640
EKY24467.1
KEGG: cla:Cla_0918 0.0016 ABC transporter, ATP-binding protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.614
EKY27133.1
Hypothetical protein; KEGG: cbk:CLL_A3399 2.4e-33 fusA; elongation factor G; K02355 elongation factor EF-G; Psort location: Cytoplasmic, score: 9.67.
  
     0.611
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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