close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22053.1Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00. (415 aa)    
Predicted Functional Partners:
EKY22052.1
KEGG: sjj:SPJ_0724 2.4e-31 methionine import ATP-binding protein MetN K02003; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.938
EKY22584.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_1760 2.1e-206 ABC transporter ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.933
EKY22054.1
Hypothetical protein.
       0.784
EKY22055.1
KEGG: uma:UM06027.1 0.00062 hypothetical protein; K01892 histidyl-tRNA synthetase.
       0.784
EKY28844.1
KEGG: lwe:lwe2133 4.6e-69 ABC transporter, ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.706
EKY28302.1
Putative bacteriocin export ABC transporter; KEGG: lwe:lwe2133 8.0e-72 ABC transporter, ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.706
EKY27886.1
ABC transporter, ATP-binding protein; KEGG: snc:HMPREF0837_10890 7.1e-64 ABC superfamily transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.706
EKY24466.1
ABC transporter, ATP-binding protein; KEGG: lmh:LMHCC_1430 1.1e-83 macrolide export ATP-binding/permease protein MacB K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.706
EKY23559.1
KEGG: llk:LLKF_0891 7.7e-51 yijD; ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.51.
  
 0.706
EKY27770.1
Hypothetical protein.
   
 
 0.656
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.