STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22055.1KEGG: uma:UM06027.1 0.00062 hypothetical protein; K01892 histidyl-tRNA synthetase. (101 aa)    
Predicted Functional Partners:
EKY22052.1
KEGG: sjj:SPJ_0724 2.4e-31 methionine import ATP-binding protein MetN K02003; Psort location: CytoplasmicMembrane, score: 9.96.
       0.784
EKY22053.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.784
EKY22054.1
Hypothetical protein.
       0.773
EKY22051.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.510
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.