Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY22058.1Transcriptional regulator, MarR family; Psort location: Cytoplasmic, score: 7.50. (174 aa)    
Predicted Functional Partners:
EKY29652.1
KEGG: bmq:BMQ_3353 6.3e-207 PTS system, beta-glucoside-specific IIABC component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.796
EKY28978.1
PTS system, beta-glucoside-specific, IIABC component.
   
 
 0.796
EKY22059.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.570
EKY22056.1
KEGG: bde:BDP_1652 5.8e-156 ATP-binding protein of ABC transporter system; Psort location: CytoplasmicMembrane, score: 9.99.
       0.514
EKY22057.1
KEGG: bde:BDP_1654 5.9e-140 ATP-binding protein of ABC transporter system; Psort location: CytoplasmicMembrane, score: 10.00.
       0.505
EKY22060.1
Hypothetical protein.
       0.487
EKY29337.1
KEGG: cbe:Cbei_4532 5.1e-212 PTS system, N-acetylglucosamine-specific IIBC subunit; K02803 PTS system, N-acetylglucosamine-specific IIB component K02804; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.469
EKY29108.1
PTS system, glucose-like IIB component.
     
 0.469
EKY26874.1
KEGG: cbt:CLH_1686 1.3e-206 treP; PTS system, trehalose-specific IIBC component; K02818 PTS system, trehalose-specific IIB component K02819; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.469
EKY26066.1
KEGG: cbk:CLL_A0331 4.7e-225 pts system, IIBC component; K02778 PTS system, glucose-specific IIB component K02779; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.469
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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