Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rnzRibonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (315 aa)    
Predicted Functional Partners:
EKY22068.1
Topoisomerase DNA-binding C4 zinc finger domain protein; KEGG: zin:ZICARI_177 2.4e-05 proS; putative prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase.
       0.675
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
   
 0.506
EKY25819.1
Exonuclease; KEGG: bce:BC3538 1.1e-14 exonuclease; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.490
EKY22067.1
KEGG: rlt:Rleg2_4805 2.3e-41 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.481
hisS
histidine--tRNA ligase.
   
 
 0.469
EKY22513.1
HDIG domain protein; KEGG: lsp:Bsph_0393 2.2e-21 3'-5' exoribonuclease YhaM K03698; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.452
EKY22249.1
KEGG: cbt:CLH_0575 1.4e-184 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA; Psort location: Cytoplasmic, score: 7.50; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
    0.449
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
  
 0.444
EKY22070.1
Low molecular weight phosphotyrosine protein phosphatase; KEGG: cbe:Cbei_2111 6.3e-56 protein tyrosine phosphatase; K03741 arsenate reductase; Psort location: Cytoplasmic, score: 7.50; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.434
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
   
  
 0.420
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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