STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY22104.1Repressor LexA; KEGG: cbe:Cbei_2575 4.9e-72 putative prophage repressor; Belongs to the peptidase S24 family. (482 aa)    
Predicted Functional Partners:
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.832
EKY29644.1
Hypothetical protein; KEGG: cbe:Cbei_1216 3.3e-18 recA; recombinase A K03553; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.799
EKY29645.1
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.799
dinB
ImpB/MucB/SamB family protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
 
 
 0.794
EKY22105.1
Aminotransferase, class I/II; KEGG: cbt:CLH_3045 7.5e-156 aspartate aminotransferase; K11358 aspartate aminotransferase; Psort location: Cytoplasmic, score: 7.50.
       0.524
EKY22103.1
Glutamate synthase; KEGG: cbt:CLH_2956 3.2e-210 gltA; putative oxidoreductase K00266; Psort location: Cytoplasmic, score: 9.97.
  
    0.511
EKY22102.1
Oxidoreductase NAD-binding domain protein; KEGG: cbk:CLL_A3214 3.0e-129 ferredoxin-NADP(+) reductase subunit alpha; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97.
       0.504
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
 
   
 0.480
EKY27007.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
   
  
 0.465
EKY24865.1
KEGG: bcz:BCZK3497 6.1e-19 adaA; AraC family transcriptional regulator K13530; Psort location: Cytoplasmic, score: 9.67.
    
   0.420
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.