Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY22119.1Sporulation protein, YlmC/YmxH family. (102 aa)    
Predicted Functional Partners:
EKY22120.1
Aspartate kinase I; KEGG: cbk:CLL_A1282 1.2e-134 aspartate kinase I K00928; Psort location: Cytoplasmic, score: 7.50; Belongs to the aspartokinase family.
     
 0.748
EKY22118.1
KEGG: cbb:CLD_2229 4.9e-120 M16 family peptidase; Psort location: Cytoplasmic, score: 7.50.
  
    0.661
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.531
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
  
    0.502
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.465
EKY22509.1
Peptidase, M16 family; KEGG: ctc:CTC01755 6.5e-86 zinc protease K01422; Psort location: Cytoplasmic, score: 7.50.
  
    0.423
EKY22112.1
DHHA1 domain protein; KEGG: bsu:BSU29250 1.1e-26 nrnA; oligoribonuclease (nanoRNAse), 3',5'-bisphosphate nucleotidase K06881; Psort location: Cytoplasmic, score: 7.50.
  
    0.412
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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