Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY21951.1PSP1 protein; KEGG: gka:GK0026 2.7e-87 signal peptidase II; Psort location: Cytoplasmic, score: 7.50. (280 aa)    
Predicted Functional Partners:
rny
YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
 
  
 0.863
EKY21952.1
KEGG: cbk:CLL_A0200 4.9e-88 DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
  
   0.843
EKY21953.1
KEGG: cnb:CNBB3750 0.0021 hypothetical protein; K12811 ATP-dependent RNA helicase DDX46/PRP5; Psort location: Cytoplasmic, score: 7.50.
  
    0.814
EKY21950.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.622
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
    0.552
EKY21954.1
Hypothetical protein; KEGG: cpy:Cphy_3915 6.2e-49 guanylate kinase/L-type calcium channel region; K00942 guanylate kinase; Psort location: Cytoplasmic, score: 7.50.
       0.501
EKY21956.1
Amidohydrolase; KEGG: ctc:CTC00218 6.6e-93 amidohydrolase K01463; Psort location: Cytoplasmic, score: 7.50; Belongs to the peptidase M20A family.
       0.431
EKY27781.1
Methyltransferase small domain protein; KEGG: ctc:CTC00225 1.6e-80 methyltransferase K00599; Psort location: Cytoplasmic, score: 7.50.
 
    0.407
EKY27427.1
Nitrogen regulatory protein P-II; KEGG: psl:Psta_0819 1.1e-86 multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the P(II) protein family.
       0.406
EKY26329.1
MOSC domain protein; KEGG: hip:CGSHiEE_01660 6.2e-05 uridine phosphorylase; Psort location: Cytoplasmic, score: 7.50.
       0.403
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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