STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY21951.1PSP1 protein; KEGG: gka:GK0026 2.7e-87 signal peptidase II; Psort location: Cytoplasmic, score: 7.50. (280 aa)    
Predicted Functional Partners:
EKY21952.1
KEGG: cbk:CLL_A0200 4.9e-88 DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
  
   0.847
rny
YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
 
  
 0.841
EKY21953.1
KEGG: cnb:CNBB3750 0.0021 hypothetical protein; K12811 ATP-dependent RNA helicase DDX46/PRP5; Psort location: Cytoplasmic, score: 7.50.
  
    0.822
EKY21950.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.629
EKY21954.1
Hypothetical protein; KEGG: cpy:Cphy_3915 6.2e-49 guanylate kinase/L-type calcium channel region; K00942 guanylate kinase; Psort location: Cytoplasmic, score: 7.50.
       0.508
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
    0.485
EKY21956.1
Amidohydrolase; KEGG: ctc:CTC00218 6.6e-93 amidohydrolase K01463; Psort location: Cytoplasmic, score: 7.50; Belongs to the peptidase M20A family.
       0.444
EKY27781.1
Methyltransferase small domain protein; KEGG: ctc:CTC00225 1.6e-80 methyltransferase K00599; Psort location: Cytoplasmic, score: 7.50.
 
    0.410
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.