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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY21958.1CorA-like protein; Psort location: CytoplasmicMembrane, score: 9.55. (314 aa)    
Predicted Functional Partners:
EKY21957.1
Hypothetical protein.
       0.584
EKY27517.1
Transporter, CPA2 family; KEGG: sun:SUN_2183 5.3e-18 cation-transporting P-tyep ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.478
EKY29414.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.463
EKY26185.1
YigZ family protein.
  
    0.457
EKY26434.1
Adenylate cyclase; KEGG: cbe:Cbei_4540 1.5e-63 adenylate cyclase; K05873 adenylate cyclase, class 2; Psort location: Cytoplasmic, score: 7.50.
  
    0.422
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
   0.422
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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