Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEZ72622.1 | EEZ72650.1 | NEICINOT_03055 | NEICINOT_03083 | Rubredoxin; KEGG: tcx:Tcr_0037 2.9e-15 rubredoxin-type Fe(Cys)4 protein K05297; Psort location: Cytoplasmic, score: 9.97. | Putative iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.532 |
EEZ72622.1 | nirK | NEICINOT_03055 | NEICINOT_05026 | Rubredoxin; KEGG: tcx:Tcr_0037 2.9e-15 rubredoxin-type Fe(Cys)4 protein K05297; Psort location: Cytoplasmic, score: 9.97. | KEGG: nma:NMA1887 2.2e-198 aniA; nitrite reductase, major outer membrane copper-containing protein K00368; Psort location: Periplasmic, score: 9.44; Belongs to the multicopper oxidase family. | 0.790 |
EEZ72650.1 | EEZ72622.1 | NEICINOT_03083 | NEICINOT_03055 | Putative iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Rubredoxin; KEGG: tcx:Tcr_0037 2.9e-15 rubredoxin-type Fe(Cys)4 protein K05297; Psort location: Cytoplasmic, score: 9.97. | 0.532 |
EEZ72650.1 | nirK | NEICINOT_03083 | NEICINOT_05026 | Putative iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | KEGG: nma:NMA1887 2.2e-198 aniA; nitrite reductase, major outer membrane copper-containing protein K00368; Psort location: Periplasmic, score: 9.44; Belongs to the multicopper oxidase family. | 0.535 |
EEZ72650.1 | norB | NEICINOT_03083 | NEICINOT_05025 | Putative iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | KEGG: nme:NMB1622 0. nitric oxide reductase K04561; Psort location: CytoplasmicMembrane, score: 10.00. | 0.732 |
EEZ72650.1 | trxA | NEICINOT_03083 | NEICINOT_03082 | Putative iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Thioredoxin; KEGG: bur:Bcep18194_A5129 4.9e-36 thioredoxin K01829; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family. | 0.406 |
nirK | EEZ72622.1 | NEICINOT_05026 | NEICINOT_03055 | KEGG: nma:NMA1887 2.2e-198 aniA; nitrite reductase, major outer membrane copper-containing protein K00368; Psort location: Periplasmic, score: 9.44; Belongs to the multicopper oxidase family. | Rubredoxin; KEGG: tcx:Tcr_0037 2.9e-15 rubredoxin-type Fe(Cys)4 protein K05297; Psort location: Cytoplasmic, score: 9.97. | 0.790 |
nirK | EEZ72650.1 | NEICINOT_05026 | NEICINOT_03083 | KEGG: nma:NMA1887 2.2e-198 aniA; nitrite reductase, major outer membrane copper-containing protein K00368; Psort location: Periplasmic, score: 9.44; Belongs to the multicopper oxidase family. | Putative iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.535 |
nirK | norB | NEICINOT_05026 | NEICINOT_05025 | KEGG: nma:NMA1887 2.2e-198 aniA; nitrite reductase, major outer membrane copper-containing protein K00368; Psort location: Periplasmic, score: 9.44; Belongs to the multicopper oxidase family. | KEGG: nme:NMB1622 0. nitric oxide reductase K04561; Psort location: CytoplasmicMembrane, score: 10.00. | 0.998 |
norB | EEZ72650.1 | NEICINOT_05025 | NEICINOT_03083 | KEGG: nme:NMB1622 0. nitric oxide reductase K04561; Psort location: CytoplasmicMembrane, score: 10.00. | Putative iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.732 |
norB | nirK | NEICINOT_05025 | NEICINOT_05026 | KEGG: nme:NMB1622 0. nitric oxide reductase K04561; Psort location: CytoplasmicMembrane, score: 10.00. | KEGG: nma:NMA1887 2.2e-198 aniA; nitrite reductase, major outer membrane copper-containing protein K00368; Psort location: Periplasmic, score: 9.44; Belongs to the multicopper oxidase family. | 0.998 |
trxA | EEZ72650.1 | NEICINOT_03082 | NEICINOT_03083 | Thioredoxin; KEGG: bur:Bcep18194_A5129 4.9e-36 thioredoxin K01829; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family. | Putative iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.406 |