STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ70979.1Sigma-54 interaction domain protein; KEGG: eci:UTI89_C2502 1.3e-76 atoC; acetoacetate metabolism regulatory protein AtoC K07714; Psort location: Cytoplasmic, score: 9.97. (505 aa)    
Predicted Functional Partners:
EEZ70978.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cvi:CV0074 1.5e-64 pilS; two-component system sensor protein K02668; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.996
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.976
EEZ72276.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ngo:NGO0176 1.6e-236 putative two-component system sensor kinase K02484; Psort location: CytoplasmicMembrane, score: 9.82.
   
 0.837
parC
DNA topoisomerase IV, A subunit; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
     
 0.750
EEZ72659.1
Oxidoreductase NAD-binding domain protein; KEGG: cvi:CV3784 1.9e-73 ubiB; CDP-6-deoxy-delta-3,4-glucoseen reductase K05901.
  
  
  0.573
rsmJ
Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA.
       0.540
EEZ71017.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: nma:NMA0160 0. putative two-component sensor; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.519
EEZ71307.1
Response regulator receiver domain protein; KEGG: eci:UTI89_C1417 1.4e-40 narL; NarL transcriptional dual regulator K07684; Psort location: Cytoplasmic, score: 9.97.
    
 0.483
EEZ71752.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: nma:NMA0670 5.1e-192 putative two-component system sensor kinase K07645; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.475
EEZ70981.1
Hypothetical protein.
       0.475
Your Current Organism:
Neisseria cinerea
NCBI taxonomy Id: 546262
Other names: N. cinerea ATCC 14685, Neisseria cinerea ATCC 14685, Neisseria cinerea str. ATCC 14685, Neisseria cinerea strain ATCC 14685
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