node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AJE17673.1 | raiA | NELON_01420 | NELON_03045 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.967 |
AJE17673.1 | rplI | NELON_01420 | NELON_03975 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.997 |
AJE17673.1 | rplY | NELON_01420 | NELON_07840 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.987 |
AJE17673.1 | rpmA | NELON_01420 | NELON_00630 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. | 0.995 |
AJE17673.1 | rpmC | NELON_01420 | NELON_01370 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
AJE17673.1 | rpsE | NELON_01420 | NELON_01415 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.998 |
AJE17673.1 | rpsI | NELON_01420 | NELON_11385 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
AJE17673.1 | rpsL | NELON_01420 | NELON_02935 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.997 |
AJE17673.1 | rpsP | NELON_01420 | NELON_04220 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
AJE17673.1 | rpsU | NELON_01420 | NELON_06645 | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 0.973 |
raiA | AJE17673.1 | NELON_03045 | NELON_01420 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL15 family. | 0.967 |
raiA | rplI | NELON_03045 | NELON_03975 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.967 |
raiA | rplY | NELON_03045 | NELON_07840 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.967 |
raiA | rpmA | NELON_03045 | NELON_00630 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family. | 0.968 |
raiA | rpmC | NELON_03045 | NELON_01370 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. | 0.967 |
raiA | rpsE | NELON_03045 | NELON_01415 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.967 |
raiA | rpsI | NELON_03045 | NELON_11385 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.968 |
raiA | rpsL | NELON_03045 | NELON_02935 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.967 |
raiA | rpsP | NELON_03045 | NELON_04220 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. | 0.967 |
raiA | rpsU | NELON_03045 | NELON_06645 | RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 0.971 |