Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFC88377.1 | tatA | NEIMUCOT_05049 | NEIMUCOT_03690 | Hypothetical protein. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.440 |
| EFC89890.1 | hisE | NEIMUCOT_03689 | NEIMUCOT_03688 | Histidine triad domain protein; KEGG: reh:H16_A3406 2.0e-32 diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase K01518; Psort location: Cytoplasmic, score: 8.96. | KEGG: nma:NMA0807 2.9e-38 hisE; phosphoribosyl-ATP pyrophosphohydrolase K01523; Psort location: Cytoplasmic, score: 9.97. | 0.605 |
| EFC89890.1 | tatA | NEIMUCOT_03689 | NEIMUCOT_03690 | Histidine triad domain protein; KEGG: reh:H16_A3406 2.0e-32 diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase K01518; Psort location: Cytoplasmic, score: 8.96. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.739 |
| EFC89890.1 | tatB | NEIMUCOT_03689 | NEIMUCOT_03691 | Histidine triad domain protein; KEGG: reh:H16_A3406 2.0e-32 diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase K01518; Psort location: Cytoplasmic, score: 8.96. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.731 |
| EFC89890.1 | tatC | NEIMUCOT_03689 | NEIMUCOT_03692 | Histidine triad domain protein; KEGG: reh:H16_A3406 2.0e-32 diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase K01518; Psort location: Cytoplasmic, score: 8.96. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.700 |
| EFC89894.1 | EFC89895.1 | NEIMUCOT_03693 | NEIMUCOT_03694 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| EFC89894.1 | tatA | NEIMUCOT_03693 | NEIMUCOT_03690 | Hypothetical protein. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.470 |
| EFC89894.1 | tatB | NEIMUCOT_03693 | NEIMUCOT_03691 | Hypothetical protein. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.470 |
| EFC89894.1 | tatC | NEIMUCOT_03693 | NEIMUCOT_03692 | Hypothetical protein. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.470 |
| EFC89895.1 | EFC89894.1 | NEIMUCOT_03694 | NEIMUCOT_03693 | Hypothetical protein. | Hypothetical protein. | 0.773 |
| EFC89895.1 | tatA | NEIMUCOT_03694 | NEIMUCOT_03690 | Hypothetical protein. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.470 |
| EFC89895.1 | tatB | NEIMUCOT_03694 | NEIMUCOT_03691 | Hypothetical protein. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.470 |
| EFC89895.1 | tatC | NEIMUCOT_03694 | NEIMUCOT_03692 | Hypothetical protein. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.470 |
| bamE | tatA | NEIMUCOT_05042 | NEIMUCOT_03690 | SmpA / OmlA family protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.427 |
| guaA | tatA | NEIMUCOT_03679 | NEIMUCOT_03690 | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.951 |
| guaA | tatB | NEIMUCOT_03679 | NEIMUCOT_03691 | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.951 |
| guaA | tatC | NEIMUCOT_03679 | NEIMUCOT_03692 | GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.426 |
| hisE | EFC89890.1 | NEIMUCOT_03688 | NEIMUCOT_03689 | KEGG: nma:NMA0807 2.9e-38 hisE; phosphoribosyl-ATP pyrophosphohydrolase K01523; Psort location: Cytoplasmic, score: 9.97. | Histidine triad domain protein; KEGG: reh:H16_A3406 2.0e-32 diadenosine tetraphosphate (Ap4A) hydrolase or other HIT family hydrolase K01518; Psort location: Cytoplasmic, score: 8.96. | 0.605 |
| hisE | tatA | NEIMUCOT_03688 | NEIMUCOT_03690 | KEGG: nma:NMA0807 2.9e-38 hisE; phosphoribosyl-ATP pyrophosphohydrolase K01523; Psort location: Cytoplasmic, score: 9.97. | Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.730 |
| hisE | tatB | NEIMUCOT_03688 | NEIMUCOT_03691 | KEGG: nma:NMA0807 2.9e-38 hisE; phosphoribosyl-ATP pyrophosphohydrolase K01523; Psort location: Cytoplasmic, score: 9.97. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.595 |
page 1 of 3