STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC89652.1Putative membrane protein; KEGG: sru:SRU_0683 0.0024 peptidase, S54 (rhomboid) family, putative; Psort location: CytoplasmicMembrane, score: 10.00. (297 aa)    
Predicted Functional Partners:
EFC89653.1
Hypothetical protein.
 
     0.834
EFC89654.1
Hypothetical protein.
       0.535
EFC89651.1
Channel protein, hemolysin III family; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.525
EFC89650.1
Hypothetical protein.
       0.491
AmiC
KEGG: nme:NMB0456 1.0e-168 N-acetylmuramoyl-L-alanine amidase K01448.
   
    0.407
folE2
TIGR00294 family protein; Converts GTP to 7,8-dihydroneopterin triphosphate.
  
    0.400
Your Current Organism:
Neisseria mucosa
NCBI taxonomy Id: 546266
Other names: N. mucosa ATCC 25996, Neisseria mucosa ATCC 25996, Neisseria mucosa str. ATCC 25996, Neisseria mucosa strain ATCC 25996
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.