node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFC89501.1 | rnpA | NEIMUCOT_03917 | NEIMUCOT_03916 | Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.983 |
EFC89501.1 | rsmJ | NEIMUCOT_03917 | NEIMUCOT_04239 | Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.468 |
coaD | rsmJ | NEIMUCOT_04111 | NEIMUCOT_04239 | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.598 |
fhs | rsmJ | NEIMUCOT_04238 | NEIMUCOT_04239 | KEGG: ngo:NGO0062 2.6e-291 putative formate--tetrahydrofolate ligase K01938; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.495 |
mnmC | rsmJ | NEIMUCOT_03539 | NEIMUCOT_04239 | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.422 |
rnpA | EFC89501.1 | NEIMUCOT_03916 | NEIMUCOT_03917 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.983 |
rnpA | rsmJ | NEIMUCOT_03916 | NEIMUCOT_04239 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.482 |
rpoN | rsmJ | NEIMUCOT_05804 | NEIMUCOT_04239 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.451 |
rsmJ | EFC89501.1 | NEIMUCOT_04239 | NEIMUCOT_03917 | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.468 |
rsmJ | coaD | NEIMUCOT_04239 | NEIMUCOT_04111 | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.598 |
rsmJ | fhs | NEIMUCOT_04239 | NEIMUCOT_04238 | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | KEGG: ngo:NGO0062 2.6e-291 putative formate--tetrahydrofolate ligase K01938; Psort location: Cytoplasmic, score: 8.96. | 0.495 |
rsmJ | mnmC | NEIMUCOT_04239 | NEIMUCOT_03539 | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.422 |
rsmJ | rnpA | NEIMUCOT_04239 | NEIMUCOT_03916 | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.482 |
rsmJ | rpoN | NEIMUCOT_04239 | NEIMUCOT_05804 | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.451 |
rsmJ | uppP | NEIMUCOT_04239 | NEIMUCOT_05935 | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.561 |
uppP | rsmJ | NEIMUCOT_05935 | NEIMUCOT_04239 | Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | Hypothetical protein; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.561 |