STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagZGlycosyl hydrolase family 3 N-terminal domain protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (350 aa)    
Predicted Functional Partners:
EFC89638.1
Phosphotransferase enzyme family; KEGG: bte:BTH_I0574 1.5e-73 hypothetical protein.
 
  
 0.934
anmK
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
   
 0.817
mpl
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.
  
   
 0.552
EFC89407.1
Na+/H+ antiporter family protein; KEGG: net:Neut_0846 0.0035 protein-disulfide reductase K05905; Psort location: CytoplasmicMembrane, score: 10.00.
       0.519
EFC89912.1
N-acetylmuramoyl-L-alanine amidase; KEGG: azo:azo3350 5.3e-55 ampD2; N-acetyl-anhydromuramyl-L-alanine amidase K01446; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.510
EFC87852.1
KEGG: nme:NMB1807 0. penicillin-binding protein 1A (penicillin-insensitive transglycosylase / penicillin-sensitive transpeptidase) K05366.
  
   
 0.478
EFC88463.1
AmpG-related permease; KEGG: eci:UTI89_C0457 3.1e-73 ampG; AmpG muropeptide MFS transporter K08218; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.468
EFC89290.1
Transglycosylase SLT domain protein; KEGG: ngo:NGO0608 1.9e-178 putative murein transglycosylase / nitrite reductase transcriptional regulator K01238; Psort location: OuterMembrane, score: 9.49.
 
   
 0.432
EFC89405.1
Peptidase Do; KEGG: nme:NMB0532 2.4e-192 htrA; protease DO; Psort location: Periplasmic, score: 9.44; Belongs to the peptidase S1C family.
  
    0.426
EFC89285.1
LD-carboxypeptidase; KEGG: ngo:NGO1274 1.4e-95 hypothetical protein K01297.
  
   
 0.410
Your Current Organism:
Neisseria mucosa
NCBI taxonomy Id: 546266
Other names: N. mucosa ATCC 25996, Neisseria mucosa ATCC 25996, Neisseria mucosa str. ATCC 25996, Neisseria mucosa strain ATCC 25996
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