node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFC88265.1 | EFC88677.1 | NEIMUCOT_05211 | NEIMUCOT_04726 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | KEGG: nme:NMB1179 9.5e-56 RNA methyltransferase, TrmH family K00599; Psort location: Cytoplasmic, score: 8.96. | 0.551 |
EFC88265.1 | PgeF | NEIMUCOT_05211 | NEIMUCOT_05207 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Conserved hypothetical protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.600 |
EFC88265.1 | cgtA | NEIMUCOT_05211 | NEIMUCOT_04096 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.739 |
EFC88265.1 | comL | NEIMUCOT_05211 | NEIMUCOT_05210 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.663 |
EFC88265.1 | rlmB | NEIMUCOT_05211 | NEIMUCOT_03519 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | RNA methyltransferase, TrmH family, group 3; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. | 0.641 |
EFC88265.1 | rplC | NEIMUCOT_05211 | NEIMUCOT_05136 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.556 |
EFC88265.1 | rplJ | NEIMUCOT_05211 | NEIMUCOT_04955 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.578 |
EFC88265.1 | rplR | NEIMUCOT_05211 | NEIMUCOT_05152 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.536 |
EFC88265.1 | rplT | NEIMUCOT_05211 | NEIMUCOT_06085 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.565 |
EFC88265.1 | trmE | NEIMUCOT_05211 | NEIMUCOT_06234 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.598 |
EFC88677.1 | EFC88265.1 | NEIMUCOT_04726 | NEIMUCOT_05211 | KEGG: nme:NMB1179 9.5e-56 RNA methyltransferase, TrmH family K00599; Psort location: Cytoplasmic, score: 8.96. | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.551 |
EFC88677.1 | cgtA | NEIMUCOT_04726 | NEIMUCOT_04096 | KEGG: nme:NMB1179 9.5e-56 RNA methyltransferase, TrmH family K00599; Psort location: Cytoplasmic, score: 8.96. | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.413 |
EFC88677.1 | rplC | NEIMUCOT_04726 | NEIMUCOT_05136 | KEGG: nme:NMB1179 9.5e-56 RNA methyltransferase, TrmH family K00599; Psort location: Cytoplasmic, score: 8.96. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.481 |
EFC88677.1 | rplT | NEIMUCOT_04726 | NEIMUCOT_06085 | KEGG: nme:NMB1179 9.5e-56 RNA methyltransferase, TrmH family K00599; Psort location: Cytoplasmic, score: 8.96. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.608 |
EFC88677.1 | trmE | NEIMUCOT_04726 | NEIMUCOT_06234 | KEGG: nme:NMB1179 9.5e-56 RNA methyltransferase, TrmH family K00599; Psort location: Cytoplasmic, score: 8.96. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.565 |
PgeF | EFC88265.1 | NEIMUCOT_05207 | NEIMUCOT_05211 | Conserved hypothetical protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family. | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.600 |
PgeF | comL | NEIMUCOT_05207 | NEIMUCOT_05210 | Conserved hypothetical protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family. | Competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.456 |
cgtA | EFC88265.1 | NEIMUCOT_04096 | NEIMUCOT_05211 | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.739 |
cgtA | EFC88677.1 | NEIMUCOT_04096 | NEIMUCOT_04726 | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | KEGG: nme:NMB1179 9.5e-56 RNA methyltransferase, TrmH family K00599; Psort location: Cytoplasmic, score: 8.96. | 0.413 |
cgtA | rlmB | NEIMUCOT_04096 | NEIMUCOT_03519 | Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | RNA methyltransferase, TrmH family, group 3; Specifically methylates the ribose of guanosine 2251 in 23S rRNA. | 0.412 |