STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC88138.1Hypothetical protein; KEGG: bbr:BB3607 3.2e-48 modification methylase K06223. (179 aa)    
Predicted Functional Partners:
EFC89567.1
Phage protein F-like protein.
 
     0.718
EFC87028.1
Hypothetical protein.
  
     0.698
EFC87008.1
Mu transposase domain protein.
  
     0.694
EFC86929.1
Hypothetical protein.
  
     0.693
EFC89530.1
Mu transposase domain protein.
  
     0.691
EFC89550.1
Hypothetical protein.
  
     0.689
EFC89531.1
Hypothetical protein.
  
     0.678
EFC87009.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.678
EFC89541.1
Hypothetical protein.
  
     0.583
EFC89564.1
Phage uncharacterized protein domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.583
Your Current Organism:
Neisseria mucosa
NCBI taxonomy Id: 546266
Other names: N. mucosa ATCC 25996, Neisseria mucosa ATCC 25996, Neisseria mucosa str. ATCC 25996, Neisseria mucosa strain ATCC 25996
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