Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFC87829.1 | EFC87830.1 | NEIMUCOT_05744 | NEIMUCOT_05745 | Hypothetical protein. | Hypothetical protein. | 0.528 |
EFC87829.1 | EFC87831.1 | NEIMUCOT_05744 | NEIMUCOT_05746 | Hypothetical protein. | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | 0.528 |
EFC87829.1 | EFC87832.1 | NEIMUCOT_05744 | NEIMUCOT_05747 | Hypothetical protein. | Hypothetical protein. | 0.528 |
EFC87830.1 | EFC87829.1 | NEIMUCOT_05745 | NEIMUCOT_05744 | Hypothetical protein. | Hypothetical protein. | 0.528 |
EFC87830.1 | EFC87831.1 | NEIMUCOT_05745 | NEIMUCOT_05746 | Hypothetical protein. | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | 0.773 |
EFC87830.1 | EFC87832.1 | NEIMUCOT_05745 | NEIMUCOT_05747 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EFC87831.1 | EFC87829.1 | NEIMUCOT_05746 | NEIMUCOT_05744 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | Hypothetical protein. | 0.528 |
EFC87831.1 | EFC87830.1 | NEIMUCOT_05746 | NEIMUCOT_05745 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | Hypothetical protein. | 0.773 |
EFC87831.1 | EFC87832.1 | NEIMUCOT_05746 | NEIMUCOT_05747 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | Hypothetical protein. | 0.773 |
EFC87831.1 | EFC89105.1 | NEIMUCOT_05746 | NEIMUCOT_04390 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | Sugar isomerase, KpsF/GutQ family; KEGG: nma:NMA2135 5.4e-156 putative isomerase K06041; Psort location: Cytoplasmic, score: 8.96; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.635 |
EFC87831.1 | EFC89444.1 | NEIMUCOT_05746 | NEIMUCOT_03860 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.951 |
EFC87831.1 | EFC89668.1 | NEIMUCOT_05746 | NEIMUCOT_04086 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; KEGG: nma:NMA1630 2.6e-124 putative acetyltransferase K02517; Psort location: CytoplasmicMembrane, score: 9.82. | 0.943 |
EFC87831.1 | lpxB | NEIMUCOT_05746 | NEIMUCOT_05105 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.605 |
EFC87831.1 | lpxC | NEIMUCOT_05746 | NEIMUCOT_05658 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | 0.484 |
EFC87831.1 | lpxD | NEIMUCOT_05746 | NEIMUCOT_04496 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.535 |
EFC87831.1 | lpxK | NEIMUCOT_05746 | NEIMUCOT_05900 | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.529 |
EFC87832.1 | EFC87829.1 | NEIMUCOT_05747 | NEIMUCOT_05744 | Hypothetical protein. | Hypothetical protein. | 0.528 |
EFC87832.1 | EFC87830.1 | NEIMUCOT_05747 | NEIMUCOT_05745 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EFC87832.1 | EFC87831.1 | NEIMUCOT_05747 | NEIMUCOT_05746 | Hypothetical protein. | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | 0.773 |
EFC89105.1 | EFC87831.1 | NEIMUCOT_04390 | NEIMUCOT_05746 | Sugar isomerase, KpsF/GutQ family; KEGG: nma:NMA2135 5.4e-156 putative isomerase K06041; Psort location: Cytoplasmic, score: 8.96; Belongs to the SIS family. GutQ/KpsF subfamily. | Lipid A biosynthesis lauroyl acyltransferase; KEGG: nme:NMB1801 2.5e-112 HtrB/MsbB family protein K02517. | 0.635 |
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