Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFC87400.1 | EFC87706.1 | NEIMUCOT_06204 | NEIMUCOT_05779 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | Prepilin-type cleavage/methylation N-terminal domain protein. | 0.844 |
EFC87400.1 | EFC87848.1 | NEIMUCOT_06204 | NEIMUCOT_05764 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | Pilus assembly protein PilP. | 0.666 |
EFC87400.1 | EFC87849.1 | NEIMUCOT_06204 | NEIMUCOT_05765 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | Pilus assembly protein, PilO. | 0.695 |
EFC87400.1 | EFC87850.1 | NEIMUCOT_06204 | NEIMUCOT_05766 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | Fimbrial assembly protein PilN. | 0.787 |
EFC87400.1 | EFC87851.1 | NEIMUCOT_06204 | NEIMUCOT_05767 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | Type IV pilus assembly protein PilM. | 0.652 |
EFC87400.1 | EFC88547.1 | NEIMUCOT_06204 | NEIMUCOT_04926 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | LysM domain protein; Psort location: Cytoplasmic, score: 8.96. | 0.627 |
EFC87400.1 | EFC88863.1 | NEIMUCOT_06204 | NEIMUCOT_04523 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | Prepilin-type cleavage/methylation N-terminal domain protein. | 0.677 |
EFC87400.1 | EFC88866.1 | NEIMUCOT_06204 | NEIMUCOT_04526 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | Hypothetical protein. | 0.788 |
EFC87400.1 | EFC89090.1 | NEIMUCOT_06204 | NEIMUCOT_04375 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | Hypothetical protein. | 0.644 |
EFC87400.1 | pilF | NEIMUCOT_06204 | NEIMUCOT_06341 | Hypothetical protein; Psort location: Extracellular, score: 9.64. | Type IV pilus biogenesis/stability protein PilW; KEGG: rba:RB12434 4.5e-05 ogt; O-GlcNAc transferase K00754. | 0.631 |
EFC87706.1 | EFC87400.1 | NEIMUCOT_05779 | NEIMUCOT_06204 | Prepilin-type cleavage/methylation N-terminal domain protein. | Hypothetical protein; Psort location: Extracellular, score: 9.64. | 0.844 |
EFC87706.1 | EFC87848.1 | NEIMUCOT_05779 | NEIMUCOT_05764 | Prepilin-type cleavage/methylation N-terminal domain protein. | Pilus assembly protein PilP. | 0.766 |
EFC87706.1 | EFC87849.1 | NEIMUCOT_05779 | NEIMUCOT_05765 | Prepilin-type cleavage/methylation N-terminal domain protein. | Pilus assembly protein, PilO. | 0.770 |
EFC87706.1 | EFC87850.1 | NEIMUCOT_05779 | NEIMUCOT_05766 | Prepilin-type cleavage/methylation N-terminal domain protein. | Fimbrial assembly protein PilN. | 0.779 |
EFC87706.1 | EFC87851.1 | NEIMUCOT_05779 | NEIMUCOT_05767 | Prepilin-type cleavage/methylation N-terminal domain protein. | Type IV pilus assembly protein PilM. | 0.741 |
EFC87706.1 | EFC88547.1 | NEIMUCOT_05779 | NEIMUCOT_04926 | Prepilin-type cleavage/methylation N-terminal domain protein. | LysM domain protein; Psort location: Cytoplasmic, score: 8.96. | 0.751 |
EFC87706.1 | EFC88863.1 | NEIMUCOT_05779 | NEIMUCOT_04523 | Prepilin-type cleavage/methylation N-terminal domain protein. | Prepilin-type cleavage/methylation N-terminal domain protein. | 0.725 |
EFC87706.1 | EFC88866.1 | NEIMUCOT_05779 | NEIMUCOT_04526 | Prepilin-type cleavage/methylation N-terminal domain protein. | Hypothetical protein. | 0.739 |
EFC87706.1 | EFC89090.1 | NEIMUCOT_05779 | NEIMUCOT_04375 | Prepilin-type cleavage/methylation N-terminal domain protein. | Hypothetical protein. | 0.728 |
EFC87706.1 | pilF | NEIMUCOT_05779 | NEIMUCOT_06341 | Prepilin-type cleavage/methylation N-terminal domain protein. | Type IV pilus biogenesis/stability protein PilW; KEGG: rba:RB12434 4.5e-05 ogt; O-GlcNAc transferase K00754. | 0.758 |
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