STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC87307.1Periplasmic binding protein. (319 aa)    
Predicted Functional Partners:
EFC87746.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.973
EFC87750.1
ABC transporter, ATP-binding protein; KEGG: nme:NMB1993 4.1e-110 iron(III) transport system ATP-binding protein K02013.
 
  
 0.973
EFC87747.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.970
EFC87306.1
TonB-dependent siderophore receptor; Psort location: OuterMembrane, score: 10.00.
 
    0.556
EFC87723.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: nph:NP3230A 0.00073 pssA; probable CDP-diacylglycerol--serine O-phosphatidyltransferase K00998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.433
EFC87724.1
ABC transporter, ATP-binding protein; KEGG: pmu:PM1080 3.5e-49 hypothetical S. dysenteriae K02013; Psort location: Cytoplasmic, score: 9.12.
 
  
 0.416
Your Current Organism:
Neisseria mucosa
NCBI taxonomy Id: 546266
Other names: N. mucosa ATCC 25996, Neisseria mucosa ATCC 25996, Neisseria mucosa str. ATCC 25996, Neisseria mucosa strain ATCC 25996
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