STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFC87160.1ABC transporter, substrate-binding protein, QAT family; KEGG: lwe:lwe1439 2.8e-136 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (509 aa)    
Predicted Functional Partners:
EFC89767.1
ABC transporter, ATP-binding protein; KEGG: san:gbs2088 2.9e-70 similar to osmoprotectant ABC transporter (ATP-binding protein) K02000; Psort location: Cytoplasmic, score: 9.12.
 0.999
EFC87376.1
Alcohol dehydrogenase, iron-dependent; KEGG: pmu:PM1453 0. adh2; alcohol dehydrogenase / acetaldehyde dehydrogenase K00001:K04072; Psort location: Cytoplasmic, score: 9.26; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.678
lpdA-2
Dihydrolipoyl dehydrogenase; KEGG: nma:NMA1556 0. lpdA; dihydrolipoamide dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenase complexes) K00382; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.621
EFC89838.1
Oxidoreductase, FAD/FMN-binding protein; KEGG: bsu:BG11716 7.6e-79 yqiG; similar to NADH-dependent flavin oxidoreductase.
 
     0.601
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.583
EFC87159.1
Heavy metal-associated domain protein; KEGG: hsa:538 1.4e-11 ATP7A, MNK; ATPase, Cu++ transporting, alpha polypeptide (Menkes syndrome) K01533; Psort location: Cytoplasmic, score: 8.96.
       0.559
EFC87168.1
KEGG: ppr:PBPRA0481 9.1e-05 hypothetical transcriptional regulator, MarR family K03828.
 
  
 0.545
EFC87161.1
CsbD-like protein; KEGG: pgi:PG1801 0.00011 v-type ATPase, subunit E, putative K02121; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0337 (CsbD) family.
       0.496
potA-2
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
  0.486
EFC89026.1
Transporter, betaine/carnitine/choline family; KEGG: shn:Shewana3_2719 1.0e-129 choline/carnitine/betaine transporter K01718; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the BCCT transporter (TC 2.A.15) family.
     
 0.483
Your Current Organism:
Neisseria mucosa
NCBI taxonomy Id: 546266
Other names: N. mucosa ATCC 25996, Neisseria mucosa ATCC 25996, Neisseria mucosa str. ATCC 25996, Neisseria mucosa strain ATCC 25996
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