Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFH24102.1 | EFH24103.1 | NEIPOLOT_00109 | NEIPOLOT_00110 | OmpA family protein; KEGG: fba:FIC_01393 3.0e-12 pyrophosphate-energized proton pump K01507; Psort location: CytoplasmicMembrane, score: 9.97. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.558 |
EFH24102.1 | EFH24104.1 | NEIPOLOT_00109 | NEIPOLOT_00111 | OmpA family protein; KEGG: fba:FIC_01393 3.0e-12 pyrophosphate-energized proton pump K01507; Psort location: CytoplasmicMembrane, score: 9.97. | Hypothetical protein. | 0.411 |
EFH24103.1 | EFH24102.1 | NEIPOLOT_00110 | NEIPOLOT_00109 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | OmpA family protein; KEGG: fba:FIC_01393 3.0e-12 pyrophosphate-energized proton pump K01507; Psort location: CytoplasmicMembrane, score: 9.97. | 0.558 |
EFH24103.1 | EFH24104.1 | NEIPOLOT_00110 | NEIPOLOT_00111 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein. | 0.551 |
EFH24104.1 | EFH24102.1 | NEIPOLOT_00111 | NEIPOLOT_00109 | Hypothetical protein. | OmpA family protein; KEGG: fba:FIC_01393 3.0e-12 pyrophosphate-energized proton pump K01507; Psort location: CytoplasmicMembrane, score: 9.97. | 0.411 |
EFH24104.1 | EFH24103.1 | NEIPOLOT_00111 | NEIPOLOT_00110 | Hypothetical protein. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. | 0.551 |
EFH24104.1 | ribF | NEIPOLOT_00111 | NEIPOLOT_00112 | Hypothetical protein. | KEGG: nmn:NMCC_0388 1.8e-161 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 8.96; Belongs to the ribF family. | 0.524 |
ribF | EFH24104.1 | NEIPOLOT_00112 | NEIPOLOT_00111 | KEGG: nmn:NMCC_0388 1.8e-161 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 8.96; Belongs to the ribF family. | Hypothetical protein. | 0.524 |