STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH23658.1Hypothetical protein. (54 aa)    
Predicted Functional Partners:
cysS
cysteine--tRNA ligase; KEGG: nmi:NMO_0084 6.8e-256 cysS; cysteinyl-tRNA synthetase K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.671
dcm-2
KEGG: nmi:NMO_0082 1.1e-168 putative type II DNA modification methyltransferase K00558; Psort location: Cytoplasmic, score: 8.96.
       0.662
EFH23656.1
KEGG: hit:NTHI1786 2.1e-110 haeIIR; type II restriction enzyme HaeII K01155.
       0.662
EFH23659.1
Hypothetical protein.
       0.572
xth-2
Exodeoxyribonuclease III; KEGG: nma:NMA0348 1.5e-141 putative nuclease; K01142 exodeoxyribonuclease III; Psort location: Cytoplasmic, score: 9.97.
       0.543
EFH23661.1
Hypothetical protein; KEGG: det:DET0692 0.0057 cobS-2; cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.543
EFH23662.1
Hypothetical protein.
       0.533
EFH23654.1
Hypothetical protein.
       0.523
Your Current Organism:
Neisseria polysaccharea ATCC 43768
NCBI taxonomy Id: 546267
Other names: N. polysaccharea ATCC 43768, Neisseria polysaccharea str. ATCC 43768, Neisseria polysaccharea strain ATCC 43768
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