STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH22477.1Putative membrane protein; KEGG: cco:CCC13826_1128 6.8e-05 phosphate acetyltransferase (phosphotransacetylase); Psort location: CytoplasmicMembrane, score: 10.00. (300 aa)    
Predicted Functional Partners:
EFH22476.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
EFH23823.1
Putative membrane protein; KEGG: rsq:Rsph17025_3305 1.9e-05 catalase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.698
EFH22478.1
Hypothetical protein.
       0.559
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.550
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
    0.426
EFH22480.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.423
Your Current Organism:
Neisseria polysaccharea ATCC 43768
NCBI taxonomy Id: 546267
Other names: N. polysaccharea ATCC 43768, Neisseria polysaccharea str. ATCC 43768, Neisseria polysaccharea strain ATCC 43768
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.