STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH22052.1Hypothetical protein; Psort location: OuterMembrane, score: 9.93. (639 aa)    
Predicted Functional Partners:
EFH22051.1
Tat pathway signal sequence domain protein; Psort location: Periplasmic, score: 9.84.
 
     0.844
EFH23713.1
KEGG: scl:sce5588 0.0010 protein kinase; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.745
EFH23292.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
  
     0.739
EFH23680.1
SCP-like protein; KEGG: slo:Shew_3130 0.0072 glutamate--tRNA ligase K01894.
  
     0.737
EFH22284.1
Tat pathway signal sequence domain protein; Psort location: Periplasmic, score: 9.84.
  
     0.723
EFH21667.1
Hypothetical protein.
  
     0.723
EFH21800.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.721
EFH21937.1
TonB-dependent lactoferrin and transferrin receptor; KEGG: hiq:CGSHiGG_06875 8.7e-25 selenocysteine synthase; Psort location: OuterMembrane, score: 10.00.
  
     0.720
EFH23714.1
DNA circulation, N-terminal domain protein.
  
     0.696
EFH23715.1
Hypothetical protein.
  
     0.688
Your Current Organism:
Neisseria polysaccharea ATCC 43768
NCBI taxonomy Id: 546267
Other names: N. polysaccharea ATCC 43768, Neisseria polysaccharea str. ATCC 43768, Neisseria polysaccharea strain ATCC 43768
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.