STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH21915.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (139 aa)    
Predicted Functional Partners:
EFH21916.1
Hypothetical protein; KEGG: bmr:BMI_II445 0.0049 phbA-2; acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase; Psort location: CytoplasmicMembrane, score: 9.83.
       0.791
EFH21917.1
DNA-binding helix-turn-helix protein; KEGG: pme:NATL1_05061 0.0033 groEL; chaperonin GroEL K04077; Psort location: Cytoplasmic, score: 8.96.
       0.520
Your Current Organism:
Neisseria polysaccharea ATCC 43768
NCBI taxonomy Id: 546267
Other names: N. polysaccharea ATCC 43768, Neisseria polysaccharea str. ATCC 43768, Neisseria polysaccharea strain ATCC 43768
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