Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFE27692.2 | EFE28166.2 | HMPREF0389_01611 | HMPREF0389_00079 | BioY family protein. | BioY family protein. | 0.908 |
EFE27692.2 | EFE28340.1 | HMPREF0389_01611 | HMPREF0389_00255 | BioY family protein. | Cobalt transport protein. | 0.928 |
EFE27692.2 | ecfA | HMPREF0389_01611 | HMPREF0389_00900 | BioY family protein. | Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.939 |
EFE27692.2 | ecfA-2 | HMPREF0389_01611 | HMPREF0389_00901 | BioY family protein. | ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.947 |
EFE28166.2 | EFE27692.2 | HMPREF0389_00079 | HMPREF0389_01611 | BioY family protein. | BioY family protein. | 0.908 |
EFE28166.2 | EFE28340.1 | HMPREF0389_00079 | HMPREF0389_00255 | BioY family protein. | Cobalt transport protein. | 0.928 |
EFE28166.2 | ecfA | HMPREF0389_00079 | HMPREF0389_00900 | BioY family protein. | Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.939 |
EFE28166.2 | ecfA-2 | HMPREF0389_00079 | HMPREF0389_00901 | BioY family protein. | ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.948 |
EFE28255.1 | EFE28340.1 | HMPREF0389_00170 | HMPREF0389_00255 | ABC transporter, ATP-binding protein. | Cobalt transport protein. | 0.855 |
EFE28255.1 | EFE28342.1 | HMPREF0389_00170 | HMPREF0389_00257 | ABC transporter, ATP-binding protein. | Conserved hypothetical protein TIGR02185. | 0.754 |
EFE28338.1 | EFE28339.1 | HMPREF0389_00253 | HMPREF0389_00254 | ABC transporter, ATP-binding protein. | ABC transporter, ATP-binding protein. | 0.827 |
EFE28338.1 | EFE28340.1 | HMPREF0389_00253 | HMPREF0389_00255 | ABC transporter, ATP-binding protein. | Cobalt transport protein. | 0.905 |
EFE28338.1 | EFE28341.1 | HMPREF0389_00253 | HMPREF0389_00256 | ABC transporter, ATP-binding protein. | ABC transporter, ATP-binding protein. | 0.836 |
EFE28338.1 | EFE28342.1 | HMPREF0389_00253 | HMPREF0389_00257 | ABC transporter, ATP-binding protein. | Conserved hypothetical protein TIGR02185. | 0.896 |
EFE28338.1 | ecfA | HMPREF0389_00253 | HMPREF0389_00900 | ABC transporter, ATP-binding protein. | Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.899 |
EFE28338.1 | ecfA-2 | HMPREF0389_00253 | HMPREF0389_00901 | ABC transporter, ATP-binding protein. | ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. | 0.427 |
EFE28339.1 | EFE28338.1 | HMPREF0389_00254 | HMPREF0389_00253 | ABC transporter, ATP-binding protein. | ABC transporter, ATP-binding protein. | 0.827 |
EFE28339.1 | EFE28340.1 | HMPREF0389_00254 | HMPREF0389_00255 | ABC transporter, ATP-binding protein. | Cobalt transport protein. | 0.886 |
EFE28339.1 | EFE28341.1 | HMPREF0389_00254 | HMPREF0389_00256 | ABC transporter, ATP-binding protein. | ABC transporter, ATP-binding protein. | 0.817 |
EFE28339.1 | EFE28342.1 | HMPREF0389_00254 | HMPREF0389_00257 | ABC transporter, ATP-binding protein. | Conserved hypothetical protein TIGR02185. | 0.879 |
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