STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glsAGlutaminase A; Belongs to the glutaminase family. (309 aa)    
Predicted Functional Partners:
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
    
 0.928
glsA-2
Glutaminase A; Belongs to the glutaminase family.
  
  
 
0.920
glnA
Glutamate--ammonia ligase, catalytic domain protein; Belongs to the glutamine synthetase family.
    
 0.910
gluD
Glutamate dehydrogenase, NAD-specific; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.903
gltA
Glutamate synthase (NADPH), homotetrameric.
   
 
 0.902
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
     
  0.900
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
     
  0.900
arcC
Carbamate kinase; Belongs to the carbamate kinase family.
     
  0.900
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
  0.900
EFE29105.1
Aldehyde dehydrogenase (NAD) family protein; Belongs to the aldehyde dehydrogenase family.
  
 0.816
Your Current Organism:
Filifactor alocis
NCBI taxonomy Id: 546269
Other names: F. alocis ATCC 35896, Filifactor alocis ATCC 35896, Filifactor alocis str. ATCC 35896, Filifactor alocis strain ATCC 35896
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