STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE28785.1Hypothetical protein. (301 aa)    
Predicted Functional Partners:
EFE28786.2
Hypothetical protein.
       0.548
nusB
Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.548
EFE28331.1
Antirestriction protein ArdA.
  
     0.524
EFE28788.2
Hypothetical protein.
       0.507
EFE29158.2
CAAX amino terminal protease family protein.
 
     0.448
EFE27792.2
Peptidase propeptide and YPEB domain protein.
  
     0.432
EFE28239.1
Hypothetical protein.
  
     0.413
EFE27791.1
Hypothetical protein.
  
     0.404
EFE29002.2
Hypothetical protein.
 
     0.401
Your Current Organism:
Filifactor alocis
NCBI taxonomy Id: 546269
Other names: F. alocis ATCC 35896, Filifactor alocis ATCC 35896, Filifactor alocis str. ATCC 35896, Filifactor alocis strain ATCC 35896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.