STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE29170.2Hypothetical protein. (607 aa)    
Predicted Functional Partners:
EFE29169.1
Response regulator receiver domain protein.
 
  
 0.965
EFE28380.1
Sugar-binding domain protein.
  
 
 0.721
EFE29123.2
Hypothetical protein.
  
     0.660
EFE28144.2
Acetyltransferase, GNAT family.
  
     0.637
EFE28805.1
Ankyrin repeat protein.
  
     0.612
EFE29160.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
  
   
 0.467
EFE29157.1
Antioxidant, AhpC/TSA family.
 
     0.441
EFE29125.1
Transcriptional regulator, TetR family.
  
     0.432
EFE29120.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Filifactor alocis
NCBI taxonomy Id: 546269
Other names: F. alocis ATCC 35896, Filifactor alocis ATCC 35896, Filifactor alocis str. ATCC 35896, Filifactor alocis strain ATCC 35896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.