STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE27736.1Hypothetical protein. (655 aa)    
Predicted Functional Partners:
EFE29152.1
Hypothetical protein.
 
     0.792
csaB
Polysaccharide pyruvyl transferase CsaB.
 
     0.788
EFE27652.1
Hypothetical protein.
  
     0.774
EFE27973.2
Copper amine oxidase domain protein.
  
     0.772
EFE27647.1
Copper amine oxidase domain protein.
 
     0.768
EFE27628.1
Copper amine oxidase domain protein.
  
     0.765
EFE29147.1
Putative membrane fusion protein.
  
     0.764
EFE28467.2
Hypothetical protein.
  
     0.740
EFE28493.1
Hypothetical protein.
 
     0.735
EFE28862.2
Copper amine oxidase domain protein.
  
     0.735
Your Current Organism:
Filifactor alocis
NCBI taxonomy Id: 546269
Other names: F. alocis ATCC 35896, Filifactor alocis ATCC 35896, Filifactor alocis str. ATCC 35896, Filifactor alocis strain ATCC 35896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.