STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE27816.2comF family protein. (245 aa)    
Predicted Functional Partners:
dprA
DNA protecting protein DprA.
 
 
 0.833
EFE28110.1
ComEC/Rec2-like protein.
 
  
 0.756
EFE28217.1
Mg chelatase-like protein.
 
  
 0.680
EFE28218.1
TIGR00252 family protein; Belongs to the UPF0102 family.
 
    0.524
EFE28330.1
Putative DNA repair protein RadC.
 
    0.506
radC
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.497
EFE28473.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
  
    0.487
EFE28003.1
comEA protein.
  
  
 0.410
EFE28279.1
Hypothetical protein.
  
    0.406
EFE28736.1
Hypothetical protein.
  
    0.406
Your Current Organism:
Filifactor alocis
NCBI taxonomy Id: 546269
Other names: F. alocis ATCC 35896, Filifactor alocis ATCC 35896, Filifactor alocis str. ATCC 35896, Filifactor alocis strain ATCC 35896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.