STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gctBGlutaconate CoA-transferase subunit B. (265 aa)    
Predicted Functional Partners:
gctA
Glutaconate CoA-transferase subunit A.
 0.999
gcdA
glutaconyl-CoA decarboxylase subunit alpha.
 
  
 0.931
fldB
R-phenyllactate dehydratase, medium subunit.
 
     0.792
hgdB
2-hydroxyglutaryl-CoA dehydratase D-component.
 
     0.762
hgdC
(R)-2-hydroxyglutaryl-CoA dehydratase activator.
 
  
  0.715
EFE27836.1
Putative glutaconyl-CoA decarboxylase subunit gamma.
  
 
 0.615
EFE28823.2
Electron transfer flavoprotein domain protein.
  
 0.594
EFE27831.1
Rubredoxin.
  
 
 0.564
EFE28825.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.511
EFE27837.1
Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
       0.456
Your Current Organism:
Filifactor alocis
NCBI taxonomy Id: 546269
Other names: F. alocis ATCC 35896, Filifactor alocis ATCC 35896, Filifactor alocis str. ATCC 35896, Filifactor alocis strain ATCC 35896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.