STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEC00619.1Protein of unknown function DUF107; COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: bsu:BSU25390 putative membrane bound hydrolase; PFAM: Nodulation efficiency, NfeD; SPTR: Putative protease/transporter; IMG reference gene:2504587151; PFAM: NfeD-like. (214 aa)    
Predicted Functional Partners:
AEC00618.1
COGs: COG4864 conserved hypothetical protein; KEGG: vpr:Vpar_0350 hypothetical protein; SPTR: UPF0365 protein SELSPUOL_00504; IMG reference gene:2504587150; PFAM: SigmaW regulon antibacterial.
 
    0.986
AEC00617.1
Hypothetical protein; SPTR: Putative dihydropteroate synthase; IMG reference gene:2504587149.
       0.666
AEC00620.1
COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: nth:Nther_2163 Na+/solute symporter; PFAM: Sodium/solute symporter; SPTR: Transporter, solute:sodium symporter family; IMG reference gene:2504587152; PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.491
AEC00621.1
COGs: COG1362 Aspartyl aminopeptidase; InterPro IPR001948; KEGG: afn:Acfer_1038 aspartyl aminopeptidase; PFAM: Peptidase M18; PRIAM: Aspartyl aminopeptidase; SPTR: M18 family aminopeptidase; IMG reference gene:2504587153; PFAM: Aminopeptidase I zinc metalloprotease (M18).
       0.491
AEC00616.1
2-hydroxy-3-oxopropionate reductase; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115; KEGG: gwc:GWCH70_0924 6-phosphogluconate dehydrogenase NAD-binding; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; PRIAM: 2-hydroxy-3-oxopropionate reductase; SPTR: 2-hydroxy-3-oxopropionate reductase; IMG reference gene:2504587148; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase.
       0.434
AEC00783.1
Band 7 protein; COGs: COG2268 conserved hypothetical protein; InterPro IPR001107; KEGG: bpb:bpr_III014 SPFH domain/band 7 family protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Epidermal surface antigen; IMG reference gene:2504587319; PFAM: SPFH domain / Band 7 family.
   
    0.424
Your Current Organism:
Selenomonas sputigena
NCBI taxonomy Id: 546271
Other names: S. sputigena ATCC 35185, Selenomonas sputigena ATCC 35185, Selenomonas sputigena DSM 20758, Selenomonas sputigena HMP_JCVI_SC0180, Selenomonas sputigena str. ATCC 35185, Selenomonas sputigena strain ATCC 35185
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.