STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE87750.1OmpA family protein; KEGG: rcm:A1E_04945 7.9e-07 gmk; guanylate kinase K03640; Psort location: OuterMembrane, score: 9.92. (93 aa)    
Predicted Functional Partners:
EFE87749.1
Autotransporter beta-domain protein; KEGG: eci:UTI89_C1627 1.6e-45 entS; EntS/YbdA MFS transporter.
       0.636
nifJ
KEGG: fnu:FN1421 0. pyruvate-flavodoxin oxidoreductase K03737.
  
   0.493
nifJ-2
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
   0.493
EFE87748.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00391570 4.4e-15 DNA polymerase family B containing protein K02350.
   
   0.430
EFE87747.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_01109810 1.7e-11 Tubulin-tyrosine ligase family protein.
   
   0.428
Your Current Organism:
Fusobacterium periodonticum
NCBI taxonomy Id: 546275
Other names: F. periodonticum ATCC 33693, Fusobacterium periodonticum ATCC 33693, Fusobacterium periodonticum str. ATCC 33693, Fusobacterium periodonticum strain ATCC 33693
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.