Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFE86975.1 | EFE87495.1 | FUSPEROL_01106 | FUSPEROL_00506 | Hypothetical protein; KEGG: pub:SAR11_0038 0.00099 dnaG; DNA primase K02316. | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | 0.754 |
EFE87495.1 | EFE86975.1 | FUSPEROL_00506 | FUSPEROL_01106 | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; KEGG: pub:SAR11_0038 0.00099 dnaG; DNA primase K02316. | 0.754 |
EFE87495.1 | EFE87496.1 | FUSPEROL_00506 | FUSPEROL_00507 | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | KEGG: fnu:FN0501 0. arginase; K01476 arginase K01581; Psort location: Cytoplasmic, score: 8.96; Belongs to the arginase family. | 0.531 |
EFE87495.1 | rpsB | FUSPEROL_00506 | FUSPEROL_00505 | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | Ribosomal protein S2; Psort location: Cytoplasmic, score: 8.96; Belongs to the universal ribosomal protein uS2 family. | 0.469 |
EFE87495.1 | tsf | FUSPEROL_00506 | FUSPEROL_00504 | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.410 |
EFE87496.1 | EFE87495.1 | FUSPEROL_00507 | FUSPEROL_00506 | KEGG: fnu:FN0501 0. arginase; K01476 arginase K01581; Psort location: Cytoplasmic, score: 8.96; Belongs to the arginase family. | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | 0.531 |
rpsB | EFE87495.1 | FUSPEROL_00505 | FUSPEROL_00506 | Ribosomal protein S2; Psort location: Cytoplasmic, score: 8.96; Belongs to the universal ribosomal protein uS2 family. | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | 0.469 |
rpsB | tsf | FUSPEROL_00505 | FUSPEROL_00504 | Ribosomal protein S2; Psort location: Cytoplasmic, score: 8.96; Belongs to the universal ribosomal protein uS2 family. | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.985 |
tsf | EFE87495.1 | FUSPEROL_00504 | FUSPEROL_00506 | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | Fic family protein; Psort location: Cytoplasmic, score: 8.96. | 0.410 |
tsf | rpsB | FUSPEROL_00504 | FUSPEROL_00505 | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | Ribosomal protein S2; Psort location: Cytoplasmic, score: 8.96; Belongs to the universal ribosomal protein uS2 family. | 0.985 |