STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE87495.1Fic family protein; Psort location: Cytoplasmic, score: 8.96. (231 aa)    
Predicted Functional Partners:
EFE86975.1
Hypothetical protein; KEGG: pub:SAR11_0038 0.00099 dnaG; DNA primase K02316.
  
     0.754
EFE87496.1
KEGG: fnu:FN0501 0. arginase; K01476 arginase K01581; Psort location: Cytoplasmic, score: 8.96; Belongs to the arginase family.
       0.531
rpsB
Ribosomal protein S2; Psort location: Cytoplasmic, score: 8.96; Belongs to the universal ribosomal protein uS2 family.
       0.469
tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
       0.410
Your Current Organism:
Fusobacterium periodonticum
NCBI taxonomy Id: 546275
Other names: F. periodonticum ATCC 33693, Fusobacterium periodonticum ATCC 33693, Fusobacterium periodonticum str. ATCC 33693, Fusobacterium periodonticum strain ATCC 33693
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