STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE87313.1Hypothetical protein. (50 aa)    
Predicted Functional Partners:
EFE87314.1
Hypothetical protein.
       0.586
EFE87315.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.586
EFE87316.1
Hypothetical protein; KEGG: fnu:FN1584 2.4e-99 beta-lactamase K01467.
       0.586
EFE87317.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.526
EFE87318.1
Putative o-succinylbenzoate synthase; KEGG: xcv:XCV3980 5.7e-91 tcbD; putative chloromuconate cycloisomerase K01860; Psort location: Cytoplasmic, score: 8.96.
       0.490
Your Current Organism:
Fusobacterium periodonticum
NCBI taxonomy Id: 546275
Other names: F. periodonticum ATCC 33693, Fusobacterium periodonticum ATCC 33693, Fusobacterium periodonticum str. ATCC 33693, Fusobacterium periodonticum strain ATCC 33693
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.