STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE86748.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (280 aa)    
Predicted Functional Partners:
EFE87345.1
Hypothetical protein.
  
     0.518
kptA
RNA 2'-phosphotransferase, Tpt1/KptA family; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
  
     0.495
EFE87871.1
Hypothetical protein.
  
     0.483
EFE86749.1
Hypothetical protein.
 
    
0.468
EFE85932.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.436
EFE85930.1
Hypothetical protein; KEGG: dha:DEHA0B08008g 0.0022 hypothetical protein; K10696 E3 ubiquitin-protein ligase BRE1; Psort location: Cytoplasmic, score: 8.96.
  
     0.427
Your Current Organism:
Fusobacterium periodonticum
NCBI taxonomy Id: 546275
Other names: F. periodonticum ATCC 33693, Fusobacterium periodonticum ATCC 33693, Fusobacterium periodonticum str. ATCC 33693, Fusobacterium periodonticum strain ATCC 33693
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.