STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE86354.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (226 aa)    
Predicted Functional Partners:
EFE86353.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
      
0.718
EFE86355.1
Hypothetical protein; KEGG: crp:CRP_111 0.0064 valyl-tRNA synthetase; K01873 valyl-tRNA synthetase; Psort location: CytoplasmicMembrane, score: 9.46.
      
0.714
EFE86352.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.668
EFE86356.1
Hypothetical protein.
       0.652
EFE86357.1
Glyoxalase family protein; KEGG: fnu:FN1050 3.0e-62 lactoylglutathione lyase K01759; Psort location: Cytoplasmic, score: 8.96.
       0.622
EFE86358.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
       0.577
EFE86359.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46.
      
0.577
EFE86360.1
Hypothetical protein.
       0.519
EFE86351.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.481
EFE86361.1
Hypothetical protein.
       0.419
Your Current Organism:
Fusobacterium periodonticum
NCBI taxonomy Id: 546275
Other names: F. periodonticum ATCC 33693, Fusobacterium periodonticum ATCC 33693, Fusobacterium periodonticum str. ATCC 33693, Fusobacterium periodonticum strain ATCC 33693
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.