STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE85703.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46. (303 aa)    
Predicted Functional Partners:
EFE85702.1
Stage II sporulation protein E; KEGG: lbi:LEPBI_I1575 1.0e-37 putative phosphodiesterase or phosphatase K07315.
       0.737
EFE85704.1
Transcriptional regulator, Rrf2 family; Psort location: Cytoplasmic, score: 8.96.
       0.697
prmC
protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
      0.595
EFE85700.1
Hypothetical protein; Displays ATPase and GTPase activities.
       0.558
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.554
hutG
Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
   
    0.531
EFE85699.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: fnu:FN1088 1.8e-222 coenzyme A disulfide reductase K00359; Psort location: Cytoplasmic, score: 9.97.
       0.530
Your Current Organism:
Fusobacterium periodonticum
NCBI taxonomy Id: 546275
Other names: F. periodonticum ATCC 33693, Fusobacterium periodonticum ATCC 33693, Fusobacterium periodonticum str. ATCC 33693, Fusobacterium periodonticum strain ATCC 33693
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.