STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFE85492.1Hypothetical protein; KEGG: tva:TVAG_144410 4.0e-06 trichohyalin; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 8.96. (150 aa)    
Predicted Functional Partners:
EFE85491.1
Hypothetical protein.
       0.718
EFE86605.1
Nodulation efficiency protein D; Psort location: CytoplasmicMembrane, score: 9.46.
  
  
 0.656
EFE85490.1
OmpA family protein; KEGG: rcm:A1E_04945 2.3e-07 gmk; guanylate kinase K03640.
  
    0.547
Your Current Organism:
Fusobacterium periodonticum
NCBI taxonomy Id: 546275
Other names: F. periodonticum ATCC 33693, Fusobacterium periodonticum ATCC 33693, Fusobacterium periodonticum str. ATCC 33693, Fusobacterium periodonticum strain ATCC 33693
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.