STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crgAUncharacterised protein family (UPF0233); Involved in cell division; Belongs to the CrgA family. (88 aa)    
Predicted Functional Partners:
SFW76686.1
DivIVA domain-containing protein.
  
   
 0.905
SFW52914.1
Peptidoglycan glycosyltransferase.
   
 
 0.885
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.876
SFW76597.1
Cell division protein FtsQ; Essential cell division protein.
  
 
 
 0.866
SFW76541.1
Cell division protein FtsI (penicillin-binding protein 3).
   
 
 0.850
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
      
 0.778
SFW53183.1
PH domain-containing protein.
 
   
 0.761
SFW53144.1
LPXTG-site transpeptidase (sortase) family protein.
 
     0.653
SFW71094.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
  
   
 0.652
SFW66107.1
Hypothetical protein.
  
     0.643
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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