STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW57932.1NitT/TauT family transport system ATP-binding protein. (262 aa)    
Predicted Functional Partners:
SFW57914.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.988
SFW57922.1
NitT/TauT family transport system permease protein.
 
 
 0.985
SFW61551.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 0.923
SFW61564.1
NitT/TauT family transport system permease protein.
 
 0.915
SFW91931.1
NitT/TauT family transport system permease protein.
 
 
 0.894
SFW81522.1
Sulfonate transport system substrate-binding protein.
 
 0.871
SFW50627.1
NitT/TauT family transport system permease protein.
 
 0.863
SFW61575.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.838
SFW13369.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.789
SFW92170.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.782
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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