STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW65336.1Hypothetical protein. (658 aa)    
Predicted Functional Partners:
SFW80780.1
Endoglucanase.
   
 0.991
SFW83029.1
Protein of unknown function.
   
 0.840
SFW92128.1
Hypothetical protein.
   
 0.840
SFW65343.1
Hypothetical protein.
       0.639
SFW76210.1
S-formylglutathione hydrolase FrmB.
    
   0.633
SFW82147.1
Enterochelin esterase.
    
   0.633
SFW84625.1
Putative esterase.
    
   0.633
SFW91101.1
Ricin-type beta-trefoil lectin domain-containing protein.
    
   0.633
SFW78123.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
    
  0.630
SFW80179.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
    
  0.630
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.