STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW70541.1Hypothetical protein. (289 aa)    
Predicted Functional Partners:
SFW70528.1
Protein of unknown function.
 
     0.960
SFW70535.1
Putative Holin-X, holin superfamily III.
 
     0.952
SFW49172.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.786
SFW69533.1
Reductase C-terminal.
  
 0.786
SFW75943.1
Reductase C-terminal.
  
 0.786
SFW78454.1
Reductase C-terminal.
  
 0.786
SFW83904.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.786
SFW91449.1
Reductase C-terminal.
  
 0.786
SFW92542.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.786
SFW92545.1
Assimilatory nitrate reductase electron transfer subunit.
  
 0.786
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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