Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFW56155.1 | SFW72832.1 | SAMN04489730_1479 | SAMN04489730_3510 | Protein of unknown function. | DSBA-like thioredoxin domain-containing protein. | 0.735 |
SFW56155.1 | SFW84372.1 | SAMN04489730_1479 | SAMN04489730_5850 | Protein of unknown function. | Hypothetical protein. | 0.688 |
SFW56155.1 | mca | SAMN04489730_1479 | SAMN04489730_1095 | Protein of unknown function. | Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.740 |
SFW56155.1 | mca-2 | SAMN04489730_1479 | SAMN04489730_2467 | Protein of unknown function. | Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.753 |
SFW56155.1 | mshB | SAMN04489730_1479 | SAMN04489730_2539 | Protein of unknown function. | N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.607 |
SFW56155.1 | mshC | SAMN04489730_1479 | SAMN04489730_5309 | Protein of unknown function. | L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.446 |
SFW56155.1 | mshD | SAMN04489730_1479 | SAMN04489730_1580 | Protein of unknown function. | Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.718 |
SFW72785.1 | SFW72832.1 | SAMN04489730_3503 | SAMN04489730_3510 | Hemoglobin. | DSBA-like thioredoxin domain-containing protein. | 0.561 |
SFW72825.1 | SFW72832.1 | SAMN04489730_3509 | SAMN04489730_3510 | Aminopeptidase N. | DSBA-like thioredoxin domain-containing protein. | 0.645 |
SFW72832.1 | SFW56155.1 | SAMN04489730_3510 | SAMN04489730_1479 | DSBA-like thioredoxin domain-containing protein. | Protein of unknown function. | 0.735 |
SFW72832.1 | SFW72785.1 | SAMN04489730_3510 | SAMN04489730_3503 | DSBA-like thioredoxin domain-containing protein. | Hemoglobin. | 0.561 |
SFW72832.1 | SFW72825.1 | SAMN04489730_3510 | SAMN04489730_3509 | DSBA-like thioredoxin domain-containing protein. | Aminopeptidase N. | 0.645 |
SFW72832.1 | SFW84372.1 | SAMN04489730_3510 | SAMN04489730_5850 | DSBA-like thioredoxin domain-containing protein. | Hypothetical protein. | 0.561 |
SFW72832.1 | SFW91020.1 | SAMN04489730_3510 | SAMN04489730_7789 | DSBA-like thioredoxin domain-containing protein. | Arsenate reductase; Belongs to the ArsC family. | 0.860 |
SFW72832.1 | mca | SAMN04489730_3510 | SAMN04489730_1095 | DSBA-like thioredoxin domain-containing protein. | Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.773 |
SFW72832.1 | mca-2 | SAMN04489730_3510 | SAMN04489730_2467 | DSBA-like thioredoxin domain-containing protein. | Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.775 |
SFW72832.1 | mshB | SAMN04489730_3510 | SAMN04489730_2539 | DSBA-like thioredoxin domain-containing protein. | N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.726 |
SFW72832.1 | mshC | SAMN04489730_3510 | SAMN04489730_5309 | DSBA-like thioredoxin domain-containing protein. | L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.602 |
SFW72832.1 | mshD | SAMN04489730_3510 | SAMN04489730_1580 | DSBA-like thioredoxin domain-containing protein. | Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.787 |
SFW84372.1 | SFW56155.1 | SAMN04489730_5850 | SAMN04489730_1479 | Hypothetical protein. | Protein of unknown function. | 0.688 |
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