STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW77808.1Acetyl-CoA carboxylase, carboxyltransferase component. (525 aa)    
Predicted Functional Partners:
SFW77815.1
propionyl-CoA carboxylase alpha chain.
 0.984
SFW73192.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
 
 0.932
SFW77796.1
Protein of unknown function.
 
 
 0.924
SFW84764.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 0.880
SFW77820.1
Hypothetical protein.
 
 
  0.879
SFW43818.1
Biotin carboxyl carrier protein /biotin carboxylase.
 
 0.870
SFW78460.1
Biotin carboxyl carrier protein /biotin carboxylase.
 
 0.870
SFW66570.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
 
 0.867
SFW85470.1
3-methylcrotonyl-CoA carboxylase alpha subunit.
 
 0.867
SFW89293.1
Urea carboxylase.
 
 0.867
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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