STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW78846.1Polar amino acid transport system ATP-binding protein. (261 aa)    
Predicted Functional Partners:
SFW78841.1
Polar amino acid transport system permease protein.
 0.999
SFW90205.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.983
SFW90203.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.982
SFW55014.1
Polar amino acid transport system permease protein.
 0.972
SFW79189.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.972
SFW92001.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.970
SFW56636.1
Polar amino acid transport system permease protein.
 0.960
SFW92310.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.916
SFW78837.1
Polar amino acid transport system substrate-binding protein.
 
 0.911
SFW56626.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.908
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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