STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW79689.1Hypothetical protein. (630 aa)    
Predicted Functional Partners:
SFW79686.1
BNR repeat-like domain-containing protein.
 
     0.637
SFW79883.1
Hypothetical protein.
  
     0.494
SFW77667.1
Proprotein convertase P-domain-containing protein.
  
  
  0.462
SFW87459.1
PucR C-terminal helix-turn-helix domain-containing protein.
  
     0.445
SFW92146.1
ABC-2 type transport system permease protein.
  
     0.417
SFW72007.1
Subtilase family protein.
  
  
  0.404
Your Current Organism:
Amycolatopsis australiensis
NCBI taxonomy Id: 546364
Other names: A. australiensis, Amycolatopsis australiensis Tan et al. 2006, Amycolatopsis sp. GY048, Amycolatopsis sp. GY049, Amycolatopsis sp. GY056, Amycolatopsis sp. GY064, Amycolatopsis sp. GY269, Amycolatopsis sp. GY276, Amycolatopsis sp. GY286, DSM 44671, JCM 15587, NCIMB 14142, strain GY048
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.